Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007584.1 Corchorus capsularis cultivar CVL-1 contig07605, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7615

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3499--3536
11
3.3
12
82
10
53
15
0
0
84
0.63
5880--5950
27
2.7
26
78
6
81
38
25
18
18
1.93
5968--5994
10
2.7
10
100
0
54
44
0
11
44
1.39
6338--6756
70
6.0
70
85
1
518
38
20
18
22
1.93
6338--6756
141
3.0
139
86
1
543
38
20
18
22
1.93
6750--6851
36
2.9
35
79
2
123
45
27
11
15
1.81
6739--6845
36
3.0
36
76
2
117
44
27
10
17
1.81
6824--7017
71
2.7
71
91
0
300
39
22
16
22
1.92
6568--7278
261
2.7
261
93
0
1199
39
22
16
20
1.92
7011--7112
36
2.9
35
80
2
132
45
26
14
13
1.83
6997--7101
36
2.9
36
78
2
122
45
25
12
16
1.82
7090--7421
72
4.7
71
90
2
497
37
20
18
23
1.94

Tables:   1

The End!