Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007595.1 Corchorus capsularis cultivar CVL-1 contig07616, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29288

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1846--1885
19
2.1
19
95
0
71
52
12
10
25
1.70
3995--4033
9
4.3
9
80
0
51
35
0
38
25
1.56
4572--4605
12
2.8
12
95
0
59
26
8
41
23
1.83
10716--10746
12
2.6
12
100
0
62
38
0
25
35
1.56
12199--12273
21
3.6
21
85
3
89
14
18
44
22
1.86
14750--14808
19
2.9
21
73
21
61
37
18
1
42
1.61
14778--14809
11
2.9
11
90
0
55
43
18
0
37
1.51
14750--14809
22
2.9
22
76
19
65
38
18
1
41
1.60
16361--16401
21
2.0
21
85
9
57
43
21
9
24
1.83
21409--21446
19
2.1
18
90
5
58
31
21
2
44
1.66
26224--26285
21
2.9
21
85
2
79
17
16
41
24
1.89

Tables:   1

The End!