Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007596.1 Corchorus capsularis cultivar CVL-1 contig07617, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3209

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2001--2600
22
27.6
22
69
12
228
35
14
10
40
1.80
2286--2393
23
4.7
23
87
2
146
37
12
6
42
1.69
2550--2600
19
2.6
20
90
6
86
25
17
11
45
1.83
2706--2921
22
9.8
22
70
12
95
33
15
10
40
1.81
2681--2851
44
3.9
44
77
3
139
34
14
9
41
1.78
2725--2853
66
2.0
66
82
3
161
34
14
10
41
1.80
2681--2847
88
1.9
88
82
4
212
33
14
10
41
1.79
2977--3023
22
2.1
22
88
0
67
42
21
6
29
1.77

Tables:   1

The End!