Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007606.1 Corchorus capsularis cultivar CVL-1 contig07627, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24737

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17--129
34
3.1
38
84
7
144
29
13
12
45
1.80
195--255
24
2.3
26
81
16
81
31
0
31
37
1.58
2892--3055
80
2.0
80
96
0
301
31
37
8
22
1.84
7650--7693
22
2.0
23
86
4
63
38
9
0
52
1.33
19318--19361
22
2.0
22
82
8
54
34
11
11
43
1.77
24502--24545
14
2.9
15
83
13
54
15
29
2
52
1.55
24594--24737
33
4.4
33
90
0
209
13
34
38
13
1.84

Tables:   1

The End!