Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007609.1 Corchorus capsularis cultivar CVL-1 contig07630, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14543

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
354--383
2
15.0
2
100
0
60
50
0
0
50
1.00
2930--2973
20
2.1
21
87
8
63
61
11
0
27
1.30
5644--5712
34
2.0
34
100
0
138
40
11
21
26
1.87
6458--6497
21
1.9
21
89
0
62
20
42
7
30
1.79
6567--6626
25
2.5
24
84
10
77
35
21
3
40
1.70
10589--10628
21
1.9
21
100
0
80
20
12
20
47
1.81
11339--11430
46
2.0
47
93
2
159
47
3
19
29
1.65
12612--12640
2
14.5
2
100
0
58
0
48
0
51
1.00
13254--13302
21
2.3
21
80
16
57
32
14
12
40
1.83
13441--13469
13
2.1
14
93
6
51
41
10
27
20
1.85

Tables:   1

The End!