Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007611.1 Corchorus capsularis cultivar CVL-1 contig07632, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23071

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3058--3145
41
2.1
41
91
0
140
18
20
14
46
1.84
3078--3184
41
2.6
41
84
1
124
23
17
14
44
1.85
5041--5065
13
1.9
13
100
0
50
24
8
20
48
1.76
5410--5447
18
2.1
19
85
14
53
47
15
10
26
1.78
10928--11125
35
5.7
35
85
7
267
34
17
8
39
1.79
10928--11133
70
2.9
70
88
1
306
34
17
8
39
1.80
12492--12523
11
2.9
11
90
0
55
37
0
18
43
1.51
12492--12551
22
2.9
22
76
19
65
41
3
18
36
1.67
12502--12539
19
2.1
18
90
5
58
44
2
21
31
1.66
13882--13930
6
8.3
6
97
2
91
34
0
14
51
1.43
15374--15412
15
2.6
15
95
0
69
43
20
28
7
1.79
18356--18387
11
2.9
11
90
0
55
37
0
18
43
1.51
18356--18415
22
2.9
22
76
19
65
41
3
18
36
1.67
18366--18403
19
2.1
18
90
5
58
44
2
21
31
1.66

Tables:   1

The End!