Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007612.1 Corchorus capsularis cultivar CVL-1 contig07633, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17495

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
276--647
156
2.4
155
80
8
418
33
22
15
29
1.94
8019--8086
31
2.2
31
86
5
93
50
8
16
25
1.73
8081--8140
22
2.7
23
87
5
72
50
8
23
18
1.74
8117--8274
51
3.0
52
79
7
196
52
6
15
24
1.67
8124--8274
54
2.9
51
80
11
198
52
7
15
25
1.68
8195--8334
62
2.2
62
85
8
178
52
6
15
26
1.66
8555--8681
22
5.8
22
74
12
118
59
4
15
20
1.55
8519--8913
65
6.3
64
71
15
213
56
6
19
17
1.63
8574--8858
43
6.9
41
73
16
171
56
6
19
17
1.63
8702--8927
22
10.6
22
74
16
151
56
7
19
16
1.65
8738--8841
38
2.6
41
85
13
128
59
6
19
14
1.57
10432--10530
42
2.4
42
82
3
119
22
23
14
40
1.90
11634--11687
29
1.9
29
85
7
76
48
3
12
35
1.60
14000--14126
53
2.3
55
90
2
204
26
18
24
30
1.98

Tables:   1

The End!