Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: AWWV01007615.1 Corchorus capsularis cultivar CVL-1 contig07636, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 933

Length: 1555
ACGTcount: A:0.39, C:0.18, G:0.13, T:0.30


Found at i:6 original size:1 final size:1

Alignment explanation


    Indices: 1--29  Score: 58
    Period size: 1  Copynumber: 29.0  Consensus size: 1

                                         
          1 TTTTTTTTTTTTTTTTTTTTTTTTTTTTT
          1 TTTTTTTTTTTTTTTTTTTTTTTTTTTTT

         30 CGTAAGTGCT


Statistics
Matches: 28,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   1   28  1.00

ACGTcount: A:0.00, C:0.00, G:0.00, T:1.00


Consensus pattern (1 bp):   
T

Done.