Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007623.1 Corchorus capsularis cultivar CVL-1 contig07644, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14326

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2870--2912
10
3.7
12
81
15
54
72
6
6
13
1.27
2868--2912
23
2.0
23
91
4
74
71
6
8
13
1.31
2931--2998
34
2.1
32
83
5
82
54
13
2
29
1.53
11450--11604
50
3.1
50
93
0
265
37
12
26
23
1.90
11844--11917
28
2.6
28
97
0
139
12
9
29
48
1.72

Tables:   1

The End!