Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007625.1 Corchorus capsularis cultivar CVL-1 contig07646, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5216

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
493--526
8
4.1
8
85
7
50
23
2
14
58
1.50
1465--1549
33
2.6
33
100
0
170
8
21
47
23
1.77
1533--1639
33
3.2
32
85
5
117
8
28
40
23
1.83
3320--3430
33
3.4
33
82
5
136
22
40
27
9
1.85
4998--5186
22
8.4
22
70
19
106
20
19
6
54
1.65
5004--5074
29
2.4
30
86
9
94
19
19
2
57
1.53
5033--5186
22
7.1
22
75
7
127
19
19
6
54
1.65
5033--5186
65
2.4
65
79
7
168
19
19
6
54
1.65
5070--5178
43
2.6
43
86
1
157
19
19
7
54
1.67

Tables:   1

The End!