Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007628.1 Corchorus capsularis cultivar CVL-1 contig07649, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31604

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8669--8739
36
2.0
35
97
2
133
46
14
19
19
1.84
12000--12069
35
2.0
35
97
0
131
44
14
20
21
1.86
13286--13321
2
18.5
2
94
5
65
47
0
0
52
1.00
19058--19086
3
9.7
3
100
0
58
34
0
0
65
0.93
20895--20941
3
16.7
3
87
12
73
31
0
0
68
0.90
22413--22438
13
2.0
13
100
0
52
53
7
0
38
1.30
27155--27440
84
3.4
84
88
4
409
41
26
8
22
1.82
27155--27434
41
6.7
41
78
10
273
42
27
7
23
1.81
27529--27560
2
16.0
2
100
0
64
50
0
0
50
1.00
31094--31128
13
2.7
13
95
0
61
60
8
11
20
1.57

Tables:   1

The End!