Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007631.1 Corchorus capsularis cultivar CVL-1 contig07652, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78513

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8663--8710
24
2.0
24
95
0
87
35
20
22
20
1.96
12618--12735
5
23.2
5
91
3
191
56
1
0
40
1.15
17867--17906
19
2.1
19
100
0
80
47
15
12
25
1.80
19050--19101
24
2.2
24
82
6
61
48
11
9
30
1.72
19639--19665
1
27.0
1
100
0
54
100
0
0
0
0.00
20910--20954
22
2.0
22
91
0
72
26
28
4
40
1.75
21105--21134
15
2.0
15
100
0
60
40
0
26
33
1.57
22262--22303
16
2.5
17
88
7
59
54
2
2
40
1.26
31430--31463
14
2.4
14
95
0
59
23
11
14
50
1.76
40216--40256
18
2.3
18
87
8
57
34
7
24
34
1.83
45803--45847
21
2.1
22
84
12
58
17
35
8
37
1.81
52725--52775
25
2.0
25
92
0
84
35
7
23
33
1.84
52997--53028
2
16.0
2
100
0
64
50
0
0
50
1.00
58477--58531
16
3.5
15
80
9
56
47
32
10
9
1.70
64268--64305
3
12.7
3
100
0
76
31
34
0
34
1.58

Tables:   1

The End!