Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007640.1 Corchorus capsularis cultivar CVL-1 contig07661, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33062

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2704--2762
30
2.0
30
86
6
84
23
28
16
30
1.97
3141--3256
33
3.5
33
93
0
178
43
15
10
31
1.80
10611--10686
28
2.8
27
85
2
107
42
27
14
15
1.86
13426--13542
57
2.1
56
96
1
216
14
26
22
36
1.92
15653--17360
855
2.0
855
97
0
3204
29
23
21
25
1.99
17484--17545
30
2.1
30
87
0
88
4
27
43
24
1.74
17530--17569
12
3.3
12
89
0
62
10
32
27
30
1.89
16949--17760
400
2.0
410
88
2
1221
20
27
24
27
1.99
19507--19538
12
2.7
12
95
0
55
6
21
43
28
1.77
21396--21478
27
3.0
27
96
1
148
40
13
10
34
1.79
21508--21600
33
2.8
33
85
0
114
44
19
10
25
1.83
23086--23116
12
2.6
12
94
0
53
6
32
41
19
1.77
23128--23167
12
3.3
12
89
0
62
7
35
27
30
1.84

Tables:   1

The End!