Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007643.1 Corchorus capsularis cultivar CVL-1 contig07664, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24304

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1549--1590
21
2.0
22
95
4
77
21
0
11
66
1.23
10151--10430
143
2.0
143
87
2
402
36
12
12
38
1.80
10985--11792
290
2.8
276
80
12
756
36
13
13
36
1.85
10978--11362
137
2.9
132
76
7
399
37
13
12
36
1.83
11102--11870
290
2.7
283
84
5
1003
36
13
13
36
1.85
12743--12792
4
12.8
4
82
4
66
44
0
6
50
1.26
16554--16582
3
9.7
3
100
0
58
31
0
0
68
0.89
19243--19336
46
2.0
47
87
2
136
30
11
18
39
1.86

Tables:   1

The End!