Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007645.1 Corchorus capsularis cultivar CVL-1 contig07666, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45568

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14660--14728
28
2.5
29
80
13
74
50
1
4
43
1.30
14751--14866
62
1.9
62
94
3
207
50
0
4
44
1.21
18000--18270
126
2.2
125
94
0
470
34
21
23
19
1.96
24400--24433
16
2.1
16
100
0
68
47
17
23
11
1.81
26600--26778
60
2.9
61
89
1
270
49
16
20
14
1.80
26601--26797
62
3.2
62
89
2
281
50
16
19
14
1.78
29418--29442
7
3.6
7
100
0
50
12
0
0
88
0.53
41282--41318
16
2.4
16
86
4
58
70
0
0
29
0.88
41273--41314
12
3.9
11
82
14
52
69
0
0
30
0.89
41754--41779
5
5.2
5
100
0
52
42
0
0
57
0.98
42763--43218
224
2.0
223
89
6
688
38
18
16
27
1.91
43192--43227
8
4.4
8
86
6
54
58
0
0
41
0.98

Tables:   1

The End!