Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007651.1 Corchorus capsularis cultivar CVL-1 contig07672, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15462

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1392--1443
21
2.5
21
87
0
77
57
1
36
3
1.28
1433--1473
18
2.3
18
86
0
55
51
9
26
12
1.70
3480--3949
235
2.0
235
98
0
904
33
20
15
29
1.94
6572--6695
33
3.7
33
81
8
144
23
41
27
7
1.80
7598--7631
8
4.1
8
85
7
50
58
14
2
23
1.50
7710--7740
5
6.4
5
92
7
55
80
0
0
19
0.71
15089--15215
48
2.6
49
81
2
157
21
32
13
33
1.92
15275--15462
62
3.0
63
81
9
188
26
22
15
35
1.95

Tables:   1

The End!