Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007653.1 Corchorus capsularis cultivar CVL-1 contig07674, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15703

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--71
21
3.5
20
77
7
70
19
19
8
52
1.72
32--78
21
2.2
21
85
7
60
19
17
10
53
1.72
65--295
22
10.3
21
75
14
171
16
20
6
55
1.64
125--181
15
3.9
15
69
4
53
15
22
5
56
1.60
160--295
21
6.3
20
76
10
119
16
20
6
56
1.62
159--314
43
3.7
41
76
13
140
15
19
6
58
1.58
282--332
25
2.0
26
81
11
61
17
13
3
64
1.42
644--738
32
2.9
32
76
16
95
23
23
7
46
1.77
786--815
15
1.9
16
93
6
53
30
13
6
50
1.67
827--916
26
3.3
26
68
14
74
26
18
4
50
1.66
731--917
55
3.4
55
87
0
277
26
18
5
49
1.70
715--941
109
2.1
107
82
8
289
25
18
6
49
1.71

Tables:   1

The End!