Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007658.1 Corchorus capsularis cultivar CVL-1 contig07679, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10572

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
734--782
26
2.0
24
84
15
64
51
12
12
24
1.73
1680--1800
65
1.9
64
86
6
174
33
20
14
32
1.92
1598--1833
22
10.8
22
70
9
117
31
16
15
36
1.90
2078--2123
23
2.0
23
86
0
65
39
15
10
34
1.82
7024--7068
10
4.2
10
86
10
54
40
11
0
48
1.39
7025--7070
11
4.2
11
89
8
67
39
10
0
50
1.38
7026--7070
23
2.0
22
91
4
72
40
11
0
48
1.39
7850--7890
11
3.8
11
80
6
57
12
2
26
58
1.46

Tables:   1

The End!