Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007663.1 Corchorus capsularis cultivar CVL-1 contig07684, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22052

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3437--3551
58
2.0
58
87
3
169
42
13
9
33
1.77
6586--6624
13
2.9
13
85
7
51
84
2
2
10
0.81
7119--7155
2
19.0
2
94
5
67
48
0
0
51
1.00
7119--7152
17
2.0
17
100
0
68
47
0
0
52
1.00
8689--8718
13
2.2
14
94
5
53
16
0
0
83
0.65
11657--11684
2
14.0
2
100
0
56
50
0
0
50
1.00
12183--12286
53
2.0
53
96
0
190
45
9
5
39
1.61
13114--13188
29
2.6
29
93
0
132
21
14
14
49
1.79
13565--13758
49
4.0
49
95
0
325
30
14
10
43
1.80
14910--14937
13
2.2
13
100
0
56
42
21
0
35
1.53

Tables:   1

The End!