Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007665.1 Corchorus capsularis cultivar CVL-1 contig07686, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9743

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
164--248
41
2.1
41
84
8
111
15
10
17
56
1.66
4859--4961
50
2.1
50
94
3
181
24
17
17
40
1.90
4963--4994
2
16.0
2
100
0
64
50
0
0
50
1.00
5154--6052
447
2.0
447
99
0
1771
33
19
14
32
1.92
6091--6197
53
2.0
53
96
0
196
36
10
24
28
1.88
6711--6758
21
2.3
21
85
0
60
8
29
29
33
1.86
7582--7868
142
2.0
142
100
0
574
31
18
15
35
1.92

Tables:   1

The End!