Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007666.1 Corchorus capsularis cultivar CVL-1 contig07687, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24255

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
991--1056
27
2.4
27
85
5
80
50
6
10
33
1.62
2790--2835
14
3.1
14
87
9
56
2
2
13
82
0.85
3995--4039
5
9.0
5
95
0
81
17
0
2
80
0.82
6414--6680
111
2.5
108
87
5
364
41
8
8
41
1.65
7163--7212
7
7.1
7
100
0
100
16
14
28
42
1.86
8300--8424
45
2.8
45
88
2
189
17
33
12
36
1.88
8390--8617
45
5.1
45
74
8
180
15
28
13
42
1.84
8534--8632
45
2.2
45
81
3
110
17
28
14
40
1.88
12560--12584
2
12.5
2
100
0
50
48
0
52
0
1.00
19373--19408
2
18.0
2
94
0
63
47
0
2
50
1.15
19456--19494
20
2.0
20
84
0
51
46
15
17
20
1.84
19864--19901
2
19.0
2
100
0
76
50
0
0
50
1.00
20847--20919
30
2.4
31
86
2
94
31
13
15
39
1.86
21122--21362
122
2.0
119
86
4
331
21
31
2
43
1.67
23865--23904
20
2.0
20
90
0
62
20
42
7
30
1.79
23873--23910
20
1.9
20
88
0
58
15
44
13
26
1.83

Tables:   1

The End!