Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007668.1 Corchorus capsularis cultivar CVL-1 contig07689, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7125

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5161--5185
13
1.9
13
100
0
50
44
0
0
56
0.99
5438--5999
22
25.7
22
69
14
218
36
14
9
39
1.80
5751--5808
23
2.5
23
86
5
82
41
12
6
39
1.69
5835--6038
22
9.5
22
72
9
109
32
15
9
42
1.79
5965--6038
20
3.6
20
88
3
103
28
14
10
45
1.79
6143--6312
22
7.8
22
69
9
71
33
14
11
40
1.82
6162--6326
66
2.5
65
79
9
158
33
14
10
41
1.81
6349--6488
22
6.4
21
69
19
74
36
16
7
39
1.78
6553--6737
22
8.3
22
70
13
110
37
17
11
33
1.85
6607--6732
44
2.9
43
80
4
137
36
13
12
37
1.83

Tables:   1

The End!