Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007669.1 Corchorus capsularis cultivar CVL-1 contig07690, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28539

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2847--2933
43
2.0
43
95
0
156
41
3
19
35
1.69
2976--3023
23
2.1
23
100
0
96
56
4
27
12
1.54
2978--3048
23
3.0
24
88
8
85
59
2
26
11
1.46
3244--3284
11
3.7
11
84
12
57
41
0
2
56
1.13
4143--4540
199
2.0
198
86
2
548
34
17
13
34
1.89
4925--4976
26
2.0
27
81
11
63
34
11
5
48
1.63
4962--5004
18
2.4
18
88
3
70
39
13
11
34
1.82
9679--9934
130
2.0
130
100
0
512
32
11
19
36
1.88
10108--10241
49
2.5
55
84
14
217
20
20
32
26
1.98
10136--10260
49
2.6
49
100
0
250
21
19
31
28
1.97
10585--10628
21
2.1
21
100
0
88
40
4
9
45
1.56
24386--24415
10
3.0
10
95
0
51
30
46
20
3
1.66
25658--26135
238
2.0
238
100
0
956
26
12
23
37
1.91

Tables:   1

The End!