Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007672.1 Corchorus capsularis cultivar CVL-1 contig07693, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14473

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1105--1255
78
1.9
78
90
2
241
36
11
1
50
1.48
1380--1433
23
2.5
21
77
11
54
51
3
7
37
1.48
1384--1427
23
1.9
23
85
0
61
50
4
6
38
1.50
1524--1775
78
3.2
79
86
7
323
51
1
12
34
1.47
1863--1893
6
5.3
6
92
7
55
48
0
16
35
1.46
4690--4873
90
2.0
90
98
0
359
27
32
7
33
1.85
8031--8084
22
2.6
20
82
8
72
0
20
0
79
0.73
8025--8100
39
1.9
40
86
7
111
0
26
0
73
0.83
10481--10510
2
15.0
2
100
0
60
50
0
0
50
1.00
10558--10624
19
3.5
18
76
9
62
53
1
2
41
1.25
11665--11694
2
15.0
2
100
0
60
50
0
0
50
1.00
11789--11893
26
3.8
25
71
26
79
40
23
15
20
1.91
11808--11890
32
3.0
26
72
24
87
39
22
13
24
1.90
11876--11977
52
1.9
51
88
9
152
36
30
14
18
1.91
11928--12030
30
3.4
30
75
10
102
40
28
11
19
1.86

Tables:   1

The End!