Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007673.1 Corchorus capsularis cultivar CVL-1 contig07694, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14300

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35--79
8
5.9
8
89
7
67
53
24
0
22
1.46
35--71
15
2.5
15
100
0
74
54
27
0
18
1.44
4866--4955
26
3.2
26
72
27
94
37
24
15
22
1.93
4864--5107
58
4.3
57
76
11
234
38
26
14
20
1.91
5005--5107
30
3.4
30
75
10
84
38
28
12
20
1.89
6624--6669
2
22.0
2
91
8
74
47
0
4
47
1.21
9670--9701
2
16.0
2
100
0
64
50
0
0
50
1.00
12639--12670
15
2.1
15
94
0
55
50
12
21
15
1.77

Tables:   1

The End!