Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007675.1 Corchorus capsularis cultivar CVL-1 contig07696, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15643

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3964--4032
27
2.6
27
90
4
104
33
2
15
47
1.61
4451--4610
60
2.7
59
85
5
223
35
16
18
29
1.93
4447--4645
31
6.5
31
74
11
135
36
17
18
28
1.93
4673--4840
31
5.5
31
67
16
136
26
19
20
33
1.96
4672--4836
60
2.7
59
89
3
258
26
19
20
33
1.96
5670--5729
19
3.1
19
90
4
93
48
0
3
48
1.18
5670--5718
10
5.1
10
73
26
52
48
0
2
48
1.12

Tables:   1

The End!