Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007676.1 Corchorus capsularis cultivar CVL-1 contig07697, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48270

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--33
2
16.5
2
100
0
66
48
0
0
51
1.00
7422--7461
3
13.3
3
100
0
80
32
0
0
67
0.91
18538--18579
18
2.4
18
84
4
50
28
9
4
57
1.51
22268--22300
13
2.5
13
85
14
50
75
0
18
6
1.00
28031--28111
33
2.5
33
84
8
110
25
9
20
43
1.83
28115--28233
33
3.6
33
93
2
195
28
8
20
42
1.81
35184--35232
12
4.2
12
84
2
55
59
14
4
22
1.52
42159--42202
6
7.5
6
97
2
81
54
13
0
31
1.39
42159--42214
18
3.2
18
87
7
53
57
12
1
28
1.46
43696--43722
14
1.9
14
100
0
54
29
29
0
40
1.57
43708--43973
99
2.6
102
86
5
360
32
18
10
37
1.85
43814--44079
76
3.6
72
90
5
351
31
20
9
38
1.84
43707--44125
35
11.8
35
78
11
431
31
19
9
38
1.84
47564--47651
36
2.4
34
82
14
90
30
31
18
19
1.95

Tables:   1

The End!