Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007678.1 Corchorus capsularis cultivar CVL-1 contig07699, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5963

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3287--3345
30
2.0
30
83
6
75
23
30
16
28
1.97
3688--3773
33
2.6
33
88
0
127
40
15
10
33
1.81
3756--3891
33
4.1
33
81
6
116
42
19
9
27
1.83
5238--5264
9
3.0
9
100
0
54
11
0
11
77
0.99
5373--5407
10
3.5
10
92
7
54
11
0
0
88
0.51
5372--5398
9
3.0
9
100
0
54
11
0
0
88
0.50

Tables:   1

The End!