Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007682.1 Corchorus capsularis cultivar CVL-1 contig07703, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33704

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
352--379
2
14.0
2
100
0
56
50
0
0
50
1.00
370--507
68
2.0
69
92
1
233
45
5
4
44
1.45
759--990
21
11.1
21
85
3
299
25
12
22
38
1.90
957--1080
64
1.9
64
85
0
167
21
12
22
43
1.85
2841--2880
4
10.0
4
94
0
71
47
25
0
27
1.52
4846--4923
41
1.9
41
100
0
156
15
14
17
52
1.75
11350--11387
2
20.0
2
89
10
62
50
0
0
50
1.00
21191--21255
19
3.4
20
72
10
64
41
10
3
44
1.55
28493--28563
31
2.3
31
85
4
90
33
23
26
15
1.95
31291--31350
11
5.8
10
79
9
59
3
11
1
83
0.84

Tables:   1

The End!