Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007685.1 Corchorus capsularis cultivar CVL-1 contig07706, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57293

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1910--1994
31
2.7
31
88
0
116
36
27
12
23
1.91
3461--3514
14
4.1
13
79
11
56
0
31
1
66
1.02
18012--18046
17
2.1
17
94
0
61
37
11
22
28
1.89
19924--19951
13
2.2
13
100
0
56
67
17
0
14
1.22
21653--21761
54
2.0
54
98
0
209
44
11
9
34
1.73
22724--22804
41
2.0
42
92
2
137
44
3
8
43
1.52
22725--22812
42
2.1
41
87
2
122
45
3
7
43
1.50
23118--23155
11
3.5
11
89
10
51
39
0
2
57
1.12
24399--24448
16
3.1
15
85
8
55
48
24
2
26
1.62
30850--30884
16
2.2
16
100
0
70
31
28
5
34
1.81
30940--31035
51
1.9
51
84
2
131
34
17
11
36
1.86
34012--34075
32
2.0
32
90
6
103
26
14
18
40
1.89
38222--38261
16
2.5
15
88
4
53
32
7
17
42
1.77

Tables:   1

The End!