Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007686.1 Corchorus capsularis cultivar CVL-1 contig07707, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7637

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3412--3436
11
2.3
11
100
0
50
44
0
8
48
1.32
3399--3440
13
3.4
12
83
12
50
45
2
4
47
1.36
3644--3732
32
2.7
34
91
3
137
40
15
8
34
1.79
3647--3748
34
3.1
34
90
2
145
41
13
6
38
1.72
5431--5489
25
2.4
25
88
5
84
40
5
3
50
1.41
5425--5606
97
1.9
95
88
7
278
34
7
3
54
1.46
6517--7630
318
3.5
318
83
6
1164
32
14
16
36
1.89

Tables:   1

The End!