Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007693.1 Corchorus capsularis cultivar CVL-1 contig07714, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15333

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5614--5641
1
28.0
1
100
0
56
100
0
0
0
0.00
6015--6185
51
3.3
49
77
12
139
40
2
14
42
1.59
6167--6206
21
2.0
21
90
5
64
55
5
5
35
1.44
6725--7370
35
18.8
35
87
5
883
39
11
17
31
1.85
7171--7232
31
2.1
28
82
11
72
40
11
19
29
1.86
8370--8445
22
3.4
22
66
16
57
43
7
18
30
1.78
8392--8463
23
3.2
23
63
31
55
43
8
19
29
1.80
8370--8467
45
2.2
45
96
0
178
42
8
20
28
1.80
9820--9902
43
1.9
43
100
0
166
24
13
4
57
1.55
10132--10179
18
2.7
18
90
0
69
56
6
12
25
1.59
10195--10227
17
2.0
17
88
5
50
51
6
3
39
1.42
11113--11153
15
2.7
15
88
0
55
48
17
26
7
1.73

Tables:   1

The End!