Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007695.1 Corchorus capsularis cultivar CVL-1 contig07716, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28564

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2998--3067
27
2.6
27
81
0
86
48
22
11
17
1.79
6673--6829
64
2.5
63
81
1
206
34
17
24
24
1.96
6813--7170
49
7.4
49
90
2
519
34
15
27
22
1.94
12631--12665
13
2.7
13
95
0
61
20
11
8
60
1.57
12662--12688
6
4.5
6
100
0
54
29
0
14
55
1.40
12977--13049
33
2.1
35
90
5
114
26
13
5
54
1.60
18167--18191
11
2.3
11
100
0
50
48
16
28
8
1.74
18219--18244
10
2.6
10
100
0
52
50
19
7
23
1.73
19157--19191
13
2.7
13
95
0
61
20
11
8
60
1.57
19188--19214
6
4.5
6
100
0
54
29
0
14
55
1.40
27886--27925
20
2.0
20
85
9
55
37
17
5
40
1.72

Tables:   1

The End!