Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007702.1 Corchorus capsularis cultivar CVL-1 contig07723, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18645

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1701--1792
42
2.2
42
90
5
141
61
19
1
17
1.40
5678--5779
30
3.4
30
79
15
113
19
10
29
40
1.86
5734--5916
53
3.4
51
85
10
224
19
14
27
38
1.90
10664--10715
8
6.8
8
88
4
63
26
0
21
51
1.47
18348--18449
30
3.4
30
80
15
122
19
11
28
40
1.87
18346--18533
60
3.3
57
81
13
219
21
13
25
39
1.90

Tables:   1

The End!