Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007704.1 Corchorus capsularis cultivar CVL-1 contig07725, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8805

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
271--373
33
3.2
30
78
11
98
39
18
10
31
1.85
290--380
33
2.8
33
87
0
128
40
17
10
30
1.84
404--525
33
3.7
33
80
5
147
39
18
11
30
1.86
419--525
33
3.2
33
81
5
153
42
20
11
25
1.85
391--534
66
2.2
67
94
1
254
41
20
10
27
1.85
2979--3078
33
3.1
33
77
7
114
10
28
40
22
1.86
3058--3099
21
2.0
21
90
0
66
14
33
30
21
1.93
7053--7115
30
2.1
30
91
5
101
20
33
15
30
1.94

Tables:   1

The End!