Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007710.1 Corchorus capsularis cultivar CVL-1 contig07731, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61581

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--509
258
2.0
259
84
4
677
38
14
13
32
1.86
564--594
2
15.5
2
100
0
62
48
0
0
51
1.00
905--987
41
2.0
41
88
0
121
28
15
18
37
1.91
1023--1096
38
1.9
38
89
5
114
27
14
17
40
1.89
1064--1162
50
2.0
50
86
5
139
26
19
16
38
1.92
1235--1388
50
3.1
50
87
0
200
31
18
14
35
1.92
1369--1417
24
2.0
24
92
0
80
26
18
4
51
1.64
1400--2067
50
13.4
50
85
4
893
26
19
18
35
1.95
1400--2060
202
3.3
201
85
5
946
26
19
18
35
1.95
1818--1945
51
2.8
43
75
17
148
24
18
22
34
1.96
2039--2093
27
2.0
27
96
0
101
25
16
7
50
1.70
1997--2146
78
1.9
78
90
2
239
26
19
14
40
1.89
2078--2197
51
2.4
51
91
0
195
28
17
14
40
1.88
1940--2195
129
2.0
127
87
4
372
25
19
15
39
1.91
9845--9886
5
8.4
5
100
0
84
80
0
0
19
0.70
33450--33487
18
2.1
18
90
0
58
15
5
65
13
1.43
37214--37283
29
2.3
30
78
7
79
42
7
21
28
1.79
37227--37297
29
2.4
29
76
2
70
49
12
15
22
1.78
43359--43387
7
4.1
7
100
0
58
0
17
0
82
0.66
55751--55972
110
2.0
111
97
0
419
39
13
6
40
1.70
61423--61456
15
2.3
15
89
0
50
52
8
17
20
1.71

Tables:   1

The End!