Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007711.1 Corchorus capsularis cultivar CVL-1 contig07732, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53538

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2540--2590
16
3.2
16
72
5
59
27
3
11
56
1.52
2593--3578
249
3.9
249
96
1
1787
31
23
11
32
1.91
7838--7869
1
32.0
1
100
0
64
100
0
0
0
0.00
15042--15120
30
2.6
31
89
2
124
37
24
3
34
1.73
20011--20076
33
2.0
33
96
0
123
53
18
16
12
1.73
31149--31179
8
3.9
8
100
0
62
9
0
38
51
1.35
43291--43337
19
2.4
20
79
13
53
31
0
0
68
0.90
43292--43337
7
7.0
7
78
14
53
32
0
0
67
0.91
48386--48609
111
2.0
111
93
0
385
45
9
21
22
1.80
48846--48924
15
4.6
17
68
23
51
50
7
0
41
1.31

Tables:   1

The End!