Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007712.1 Corchorus capsularis cultivar CVL-1 contig07733, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35003

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6888--6957
29
2.4
29
85
2
86
40
28
10
21
1.85
12986--13029
22
2.0
22
86
0
61
27
18
15
38
1.91
16960--16992
12
2.6
13
85
9
50
33
15
0
51
1.43
19462--19499
11
3.5
11
89
10
51
39
0
2
57
1.12
21223--21251
2
14.5
2
100
0
58
51
0
0
48
1.00
28222--28247
4
6.5
4
100
0
52
50
0
0
50
1.00
33660--33696
16
2.3
16
100
0
74
37
5
27
29
1.79
34611--34650
20
2.0
20
100
0
80
30
10
5
55
1.54

Tables:   1

The End!