Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007715.1 Corchorus capsularis cultivar CVL-1 contig07736, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20609

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49--93
13
3.5
13
90
3
74
22
13
8
55
1.65
343--4757
331
13.5
331
80
7
4304
34
16
14
33
1.90
399--4757
652
6.7
652
79
8
3966
34
16
14
33
1.90
5195--6870
26
59.7
26
78
12
1215
32
22
15
28
1.95
5195--6952
58
31.1
55
79
11
1378
32
22
15
29
1.95
5834--5915
16
5.1
16
63
16
53
36
17
15
30
1.91
5195--6933
110
15.4
108
79
13
1550
32
22
15
29
1.95
10375--10400
1
26.0
1
100
0
52
100
0
0
0
0.00
12402--14414
663
3.0
662
87
2
2807
35
17
13
33
1.89
12402--14414
332
6.1
332
86
3
2650
35
17
13
33
1.89
15048--15627
300
1.9
299
84
4
776
35
18
13
32
1.89
15335--16579
332
3.8
329
85
2
1518
35
15
14
34
1.89
16957--17030
30
2.4
31
88
2
105
29
16
12
41
1.84

Tables:   1

The End!