Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007720.1 Corchorus capsularis cultivar CVL-1 contig07741, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15870

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2013--2038
11
2.4
11
100
0
52
42
7
23
26
1.81
3072--3106
16
2.2
16
94
0
61
54
5
28
11
1.59
4213--4267
22
2.5
22
80
8
67
80
0
12
7
0.91
11170--11235
26
2.6
25
76
7
69
74
9
15
1
1.14
12576--12827
105
2.4
105
95
0
459
24
23
16
35
1.95
12912--13794
77
11.4
76
90
4
1315
23
16
20
38
1.93
12912--13794
153
5.7
153
90
4
1328
23
16
20
38
1.93
13730--13875
43
3.5
43
75
17
130
21
16
21
39
1.92
12916--13875
118
8.2
119
72
17
516
23
16
20
38
1.93
13846--14063
85
2.6
83
75
12
210
31
16
19
33
1.94
14763--14797
16
2.2
16
100
0
70
51
5
31
11
1.61
15281--15315
16
2.2
16
94
0
61
5
25
54
14
1.62

Tables:   1

The End!