Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007724.1 Corchorus capsularis cultivar CVL-1 contig07745, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55056

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
728--777
23
2.1
24
81
7
57
30
6
20
44
1.75
4882--4967
43
2.0
43
93
0
145
34
26
4
33
1.77
5904--6130
109
2.1
109
93
2
386
39
11
1
47
1.50
6804--6838
18
1.9
18
100
0
70
31
5
22
40
1.78
8145--8203
30
2.0
30
86
6
84
22
28
16
32
1.96
11592--11622
14
2.1
15
94
5
55
48
0
0
51
1.00
13272--13309
14
2.7
15
88
8
53
42
0
7
50
1.31
14309--14354
19
2.2
22
85
11
62
21
0
41
36
1.54
16239--16280
21
2.0
20
86
4
57
40
11
21
26
1.88
28029--28060
12
2.5
13
95
5
57
21
15
9
53
1.70
28057--28090
6
5.5
6
93
6
59
32
0
14
52
1.42
28057--28090
13
2.8
12
91
8
59
32
0
14
52
1.42
28111--28143
15
2.3
15
89
5
50
27
9
6
57
1.53
38157--38227
27
2.5
28
81
4
90
15
14
23
46
1.82

Tables:   1

The End!