Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007729.1 Corchorus capsularis cultivar CVL-1 contig07750, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21820

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2876--2900
2
12.5
2
100
0
50
48
0
0
52
1.00
6101--6249
75
2.0
75
97
0
280
27
22
19
30
1.98
7249--7291
20
2.3
19
84
11
61
37
2
0
60
1.10
7255--7297
20
2.2
19
83
4
50
41
2
0
55
1.12
12368--12404
16
2.3
16
90
0
56
48
2
0
48
1.15
12536--12565
2
15.0
2
100
0
60
50
0
0
50
1.00
16975--17081
32
3.3
32
88
0
151
14
11
38
35
1.82
16961--17081
16
7.5
16
68
15
79
14
11
38
34
1.83
17271--17332
16
3.9
16
78
2
72
3
11
33
51
1.54
21490--21527
9
4.2
9
90
10
60
10
21
44
23
1.83

Tables:   1

The End!