Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007732.1 Corchorus capsularis cultivar CVL-1 contig07753, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49539

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1330--1411
33
2.5
33
82
7
96
26
14
28
30
1.95
9841--9930
47
1.9
47
93
4
155
50
6
16
26
1.70
10210--10247
11
3.5
11
89
10
51
39
0
2
57
1.12
11872--11927
29
1.9
30
85
10
80
51
12
8
26
1.69
11973--12014
19
2.2
20
86
4
59
69
2
14
14
1.30
20871--21056
93
2.0
93
94
0
327
33
11
24
29
1.91
23567--23627
30
2.0
30
87
6
86
62
0
1
36
1.05
23564--23619
19
2.9
19
69
10
51
64
0
1
33
1.04
27098--27147
25
2.0
25
100
0
100
28
20
8
44
1.79
32759--32788
14
2.1
14
100
0
60
60
0
0
40
0.97
37951--37990
20
2.0
20
85
0
53
15
7
20
57
1.61
41059--41709
67
9.8
67
79
10
572
41
15
18
24
1.89
41782--41806
13
1.9
13
100
0
50
12
0
0
88
0.53
45409--45448
21
1.9
21
84
0
53
17
25
25
32
1.97
48457--49006
109
5.0
108
88
4
771
34
13
16
35
1.87
48457--49004
217
2.5
216
90
5
828
34
13
15
35
1.87

Tables:   1

The End!