Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007736.1 Corchorus capsularis cultivar CVL-1 contig07757, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12769

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
291--315
11
2.3
11
100
0
50
0
0
8
92
0.40
1209--1237
2
14.5
2
100
0
58
51
0
0
48
1.00
1270--1302
3
10.7
3
93
6
57
66
0
0
33
0.92
1271--1301
16
1.9
16
100
0
62
64
0
0
35
0.94
2079--2103
2
12.5
2
100
0
50
52
0
0
48
1.00
2078--2119
12
3.4
13
80
12
52
52
2
2
42
1.27
2270--2363
17
5.6
17
88
1
111
31
31
13
22
1.93
2321--2364
16
2.8
16
100
0
88
22
31
20
25
1.98
3778--3817
21
1.9
21
94
0
71
20
17
30
32
1.95
4336--4687
156
2.3
155
78
9
353
34
19
15
30
1.93

Tables:   1

The End!