Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007737.1 Corchorus capsularis cultivar CVL-1 contig07758, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34456

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6--41
2
18.0
2
100
0
72
50
0
0
50
1.00
1907--1934
12
2.3
12
100
0
56
14
0
0
85
0.59
1963--2130
86
2.0
83
85
8
223
29
23
19
27
1.98
30724--30754
10
3.1
10
95
0
53
9
22
9
58
1.59
32894--32924
2
15.5
2
100
0
62
51
0
0
48
1.00
33345--33669
147
2.2
147
98
0
625
38
9
15
36
1.81
33978--34012
2
17.5
2
100
0
70
48
0
0
51
1.00

Tables:   1

The End!