Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007745.1 Corchorus capsularis cultivar CVL-1 contig07766, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28248

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
362--557
76
2.6
76
90
0
313
17
25
29
27
1.98
9102--9483
189
2.0
189
97
0
719
35
19
14
30
1.92
12076--12736
62
10.6
62
81
5
742
35
13
23
27
1.92
12082--12736
126
5.2
123
91
2
800
35
12
23
27
1.92
12727--12834
49
2.2
49
88
0
153
31
13
29
25
1.94
14077--14106
16
1.9
15
93
6
51
26
33
6
33
1.83
14600--14668
22
3.1
22
83
4
86
26
17
37
18
1.93
15842--15873
13
2.5
13
95
5
57
40
6
15
37
1.73
19925--19954
2
15.0
2
100
0
60
0
0
50
50
1.00

Tables:   1

The End!