Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007746.1 Corchorus capsularis cultivar CVL-1 contig07767, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13146

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4118--4226
53
2.0
54
85
3
148
39
13
24
22
1.90
8740--8855
26
4.4
26
76
12
112
13
15
40
30
1.86
8762--8857
13
7.3
13
65
29
53
16
14
41
27
1.87
8740--8858
53
2.3
52
86
4
159
14
15
40
30
1.86
8898--8927
15
2.0
15
93
0
51
10
20
50
20
1.76
10114--10223
50
2.2
50
81
0
139
13
21
22
41
1.88
10683--11265
44
13.3
43
88
3
695
12
15
24
46
1.81
10699--11248
219
2.5
217
84
4
678
13
15
24
46
1.82
11256--11435
58
3.1
58
88
4
267
17
22
17
42
1.89
11686--11861
97
1.8
96
82
3
228
13
27
22
36
1.91
12208--12508
126
2.4
126
94
0
530
16
26
25
30
1.97
12396--12617
109
2.0
108
93
0
381
17
25
26
31
1.97
12504--12922
126
3.3
125
93
0
676
15
26
26
30
1.96
12270--12922
235
2.7
235
91
4
1002
15
26
26
31
1.96
12969--13136
90
1.9
90
86
2
239
12
26
33
27
1.92

Tables:   1

The End!