Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007752.1 Corchorus capsularis cultivar CVL-1 contig07773, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30604

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2970--3000
5
6.4
5
92
7
55
22
0
0
77
0.77
3079--3112
8
4.1
8
85
7
50
23
2
14
58
1.50
4054--4127
33
2.2
34
83
7
98
12
28
36
22
1.90
13416--13443
13
2.2
13
100
0
56
42
21
14
21
1.88
14470--14532
30
2.1
30
85
5
83
23
31
14
30
1.94
18412--18490
40
2.0
41
94
2
142
43
0
12
44
1.42
20926--20964
15
2.6
15
95
0
69
35
17
30
15
1.91
23287--23389
52
2.0
51
92
7
174
43
5
16
33
1.72
27268--27306
20
2.0
20
89
0
60
15
30
20
33
1.94
27714--27761
16
2.9
17
81
6
55
18
22
25
33
1.97

Tables:   1

The End!