Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007758.1 Corchorus capsularis cultivar CVL-1 contig07779, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17335

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
354--395
3
14.0
3
94
0
75
64
0
2
33
1.07
463--492
15
2.0
15
100
0
60
20
13
26
40
1.89
4715--4754
14
2.9
15
82
14
50
70
0
5
25
1.08
4952--5021
16
4.4
16
89
7
115
4
14
40
41
1.65
5011--5055
17
2.6
17
92
0
72
2
24
51
22
1.60
7798--7845
20
2.3
21
85
3
62
68
6
6
18
1.32
8569--8613
16
2.8
17
80
12
51
66
4
15
13
1.39
10093--10142
22
2.2
23
85
3
66
4
12
4
80
1.00
16354--16391
2
20.0
2
84
10
53
52
0
0
47
1.00
16923--16970
22
2.2
22
78
10
55
37
16
6
39
1.74
17077--17130
22
2.5
22
87
0
72
33
14
9
42
1.78

Tables:   1

The End!