Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007762.1 Corchorus capsularis cultivar CVL-1 contig07783, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2903

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1735--1793
25
2.4
25
91
5
95
35
23
0
40
1.55
1803--1870
26
2.6
26
95
0
118
54
10
0
35
1.35
1803--1847
15
3.3
15
76
23
62
53
11
0
35
1.37
1925--1954
9
3.2
9
90
9
51
80
0
0
20
0.72
1925--1954
10
3.1
10
95
4
53
80
0
0
20
0.72
2036--2067
14
2.3
14
94
0
55
56
3
0
40
1.15
2234--2272
21
1.9
21
89
5
62
35
7
35
20
1.81

Tables:   1

The End!